SubtiBank SubtiBank
yoxD [2019-04-16 13:34:57]
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yoxD [2019-04-16 13:34:57]

similar to 3-oxoacyl- acyl-carrier protein reductase
locus
BSU18500
pI
5.33
mw
25.15 kDa
protein length
238 aa Sequence Blast
gene length
717 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.4|Phosphoproteins] → [category|SW 6.4.8|Phosphorylation on either a Ser, Thr or Tyr residue]
  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    2,018,554 2,019,270

    The protein

    Paralogous protein(s)

  • [protein|B6FF689E65906186F3576B378650D713DB84EDDA|YcdF], [protein|EAEEA4DD9641919830A81185333A2610B964D37C|YhdF], [protein|439B468A13137000FB42E9389391CB4986FFED84|FabG]
  • [protein|6047F2493FCE3D2A9BDB1AD88E5926ECEED81036|YhxC]:

    • Modification

  • phosphorylated on ser/ thr/ tyr [Pubmed|16493705]

    • Structure

  • [PDB|2C07] (from Plasmodium Falciparum 37% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|6BA346D8A7B496F9618AFAB4FEEF4BD1A41D2C7E|yoxD]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-B094 (yoxD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1093 NBRP B. subtilis, Japan]
  • BKE18500 ([gene|6BA346D8A7B496F9618AFAB4FEEF4BD1A41D2C7E|yoxD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE18500 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATTGAAGCACCCTTTCTT, downstream forward: _UP4_TAAAAATGAAAACCTGTCTT
  • BKK18500 ([gene|6BA346D8A7B496F9618AFAB4FEEF4BD1A41D2C7E|yoxD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK18500 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATTGAAGCACCCTTTCTT, downstream forward: _UP4_TAAAAATGAAAACCTGTCTT

    • References

  • 16493705